CDS
| Accession Number | TCMCG077C24843 |
| gbkey | CDS |
| Protein Id | KAF5750099.1 |
| Location | complement(join(7549837..7550721,7550868..7551018,7551089..7552983,7553603..7554109)) |
| Organism | Tripterygium wilfordii |
| locus_tag | HS088_TW03G00431 |
Protein
| Length | 1145aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA542587, BioSample:SAMN11634134 |
| db_source | JAAARO010000003.1 |
| Definition | RNA-dependent RNA polymerase 1-like isoform X2 [Tripterygium wilfordii] |
| Locus_tag | HS088_TW03G00431 |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGGGAAAACACTTCGTGTGTCTGGATTCCGTTCTACAGTTTCTGCAGACTCAGTTAAAGAATTTCTGGAATTATATACGGGCGAAGGAACTGTCGATGCTCTTAAGATTCGTTACCCTAAGAATGGAGGTTCCAGAGTTTATGCTATTGTCCAATTCACCACCACCGAAGATGCTGAGCTTCTTGCTGACAATCGCCTGAGGTATGGGAATTCATATCTGGAGGCTCAATTCATGGATCGTGATACCATACCAAAGCCAAGGACCTTTTTGCACATTATGGAAAAGATAAAGCTGATGTTTGGCTGTCAGATTTCAAAAGAAATGTTTGCTGTTCTGTGGGAGCGGTTTAATGTTAATGTGAAGTTTGGGATTGGTATGAAAAGATTTCATTTTTTCATGTCTTATCGACAGACTGAGTACAAATTTGATCTTTGGTACGAGAACATTTGGCAGATTGAGCTACGTCGTCCTCGAGGTCAAAATGCAAAGTATCTTCTAATTCAGCTATATGGGGCTCCTCGGATTTATGAGAAAGGTGCACGCTCTTCGTGCAATATACTTGAAGATCCTTATTTCAACTTTTTCAAGGACACCCCAGATGACCAGTGGGTCAGGGCAGTTGATTTCACTCCATCATGCTGTATTGGGCAGTCATCTGCTTTATGCTTGGAGCTTCCTCATGGTATCCAGCTTCCAAATTTTCAGGAGAACTTTCCATATTACACAAGAACTGAAGGAAGTTTTACTCTGTTTGATGACGGCGGCTTTTCTTCTAGTCTGGATCTTGTACCCGTTGTAAGTCCTCCTGGTGGCATTGACTTGCCATACAAGATCATATTTATGGTTAATAGGTTAGTTCAACATGGGTGCCTTCCCGGGTCAAGACTTGATACGAGGTTTTATCGGCTGGTTGATCCACGCAAATTTAACATTGTCTTCATCGAGCATGCTCTTGAGAAACTGTTTAACTTGAAAGAATGTTGCTATGAACCCTCCAACTGGCTCTCTGTGGAGTATAAGAAATACCATACATCTAGGAGTCCTCCCATATCACCTGCTATATCCTTGGATACTGGTTTGGTATATGTACGAAGGGTTCAAATAACTCCTTGTAAAGTGTATTTCTGTGGGCCAGAAGTTAATGTCTCAAATGGAGTGCTACGCAATTACCCTGAAGATGTTGATAATTTTCTTCGTGTTTCTTTTGTTGATGAAGAGCTGGGAAAAATTCAGTCAACAGATTTGTCTCCACGTACATCTTCTGGAAATGAGGATAGGAGAACTGGGATCTACGAAAGGATACTTTCTACTCTTCAGAATGGTCTGGTTATTGGTGATAAGAAGTTTGAATTTCTTGCCTTTTCATCAAGTCAATTGAAGGAAAATTCTGTGTGGATGTTTGCATCTAGATTTGGGCTAACTGCTGCAGATATAAGAACTTGGATGGGCGATTTTCGTCGAATAAGAAATGTGGCTAAATATGCTGCCAGATTGGGCCAATCGTTCAGCTCATCAACTGAAACTCTTAGTGTTGGTCGGCATGAAATTGAAATTATTCGTGATGTAGAGGTTAAAAGGGGTGATCTCACATATGTTTTTTCTGATGGAATTGGGAAAATATCTTCTGGATTCGCTAGGGAAGTGGCCATAAAATGCGGCCATAAAGCTTTTGTTCCATCCGCTTTTCAGATTCGATATGGTGGATACAAAGGTGTGGTGGCTGTCGATCCAAAATCATCGAAGAAACTTTCGCTGAGAAAGAGCATGTGTAAATATGAATCAAGAAACACGAAACTGGATGTTCTGGCATATAGCAAGTATCAATCCTATTTTCTGAATCGTCAATTGATCACCCTTCTCTCAACTCTTGGTGTTCCAGATGCTGTTTTTGAGAGAAAACAAAGAGAAGCTGTAGCTCAACTGGATGCCATCTTAACAGATCCATCAAAGGCAATGGATGCACTGGAGTTGATGCATCCAGGAGAGACCACAAACATTCTTAAGGAAATGCTTTTATGTGATTATAAGCCTGATGGTGAGCCATTCCTTTCAATGATGCTTCAAACATTCCGAGCATCAAAGCTGTTGAATTTAAGGATTAAAACTAAGATATATGTCCAAAATGGAGGAAATATGATGGGTTGTCTAGATGAAACCAGATCCTTGGAATATGGGCAGGTGTTTGTACAAATTTCTGGTGCTAAGCATTGGCAGTTACACGGTAGTTTTCACGAGTCTGGTGGTAGCATACAGAAGCAGCATATTATTGTTCTGGATGATGTGTTTGTTGCTAAAAATCCATGCTTGCATCCAGGAGATGTGCGTGTTTTAAAGGCTGTGAATGTGCCAGCTTTGCACCATATGGTGGATTGTGTTGTTTTTCCACAAAGAGGACCAAGACCTCACCCAAATGAATGTTCGGGAAGTGATTTAGATGGAGATTTCTACTTTGTCTGTTGGGATCCTGAATTAATTCCACGTTGGCAAATTCCTCCCATGGATTATACCCCACAACCTTGCAAGCTTTTGGATCATGATGTTACTATTGAGGAAGTAGAGGAGTATTTCACCAACTACATACTCAATGACAGCTTAGGAATTATTTCAAATGCTCACATAGTCTTTGCTGATAGAGAGCCGTTGAAGGCAATGAGTGAACCTTGTCTAGAGCTTGCACAAAAGGCTTCAATTGCAGTTGACTTCGCAAAAACTGGTGTACCAGCAGAAATTCCTTCTCATCTACGTGTCAAAGAATTCCCAGATTTCATGGAAAAGCCTGACAAACCCTCCTATGAATCACGCAATGTGATTGGGAAGCTTTTCCGAGAAGTGAAAGACATTGCACCGCATACAAGTTCCATCAGATCCTTCACTCGTGAAGTGGCTAGGAAGTCTTATGACCCTGACATGGAAGTTGACGGCTTTGAATATTACATTGCTGATGCTTTTCGCCACAAAAGCAATTACGACTATGTGTTGGGAAATTATATGGACTATTATGGGATAAAGACTGAAGCTGAAATATTTGGAGGCAGTATAATGAACATGTCAAAATCTTTCACCAAGAAAAGGGATGCAGAAGCAATTCGTATGGCTGTTAGGTCATTGAGAAAGAAGGCTCGGTCGTGGTTCAATGAGAGCAGCAGCGACATAGATTCTGATGCTGACAATGTATATGCAAAAGCCTCAGCTTGGTACTACGTCACCTATCACCATACTTATTGGGGTACCTATAATGAGGGAATGAATCGAGATCATTTTCTCAGCTTCGCATGGTGTATTTACGACAAACTGATCGAGATCAAGAAGCGAAAGATCGAGATCAAGAAGCGAAAACTCGCAAGTAGAAGGCCTTCACGCATGCCATATTATCCGCAGAATGACTTCTTGAATGGCTTTGGAGATGAGTTTAACCATGGACTAAGTTTGAGCTGA |
| Protein: MGKTLRVSGFRSTVSADSVKEFLELYTGEGTVDALKIRYPKNGGSRVYAIVQFTTTEDAELLADNRLRYGNSYLEAQFMDRDTIPKPRTFLHIMEKIKLMFGCQISKEMFAVLWERFNVNVKFGIGMKRFHFFMSYRQTEYKFDLWYENIWQIELRRPRGQNAKYLLIQLYGAPRIYEKGARSSCNILEDPYFNFFKDTPDDQWVRAVDFTPSCCIGQSSALCLELPHGIQLPNFQENFPYYTRTEGSFTLFDDGGFSSSLDLVPVVSPPGGIDLPYKIIFMVNRLVQHGCLPGSRLDTRFYRLVDPRKFNIVFIEHALEKLFNLKECCYEPSNWLSVEYKKYHTSRSPPISPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNGVLRNYPEDVDNFLRVSFVDEELGKIQSTDLSPRTSSGNEDRRTGIYERILSTLQNGLVIGDKKFEFLAFSSSQLKENSVWMFASRFGLTAADIRTWMGDFRRIRNVAKYAARLGQSFSSSTETLSVGRHEIEIIRDVEVKRGDLTYVFSDGIGKISSGFAREVAIKCGHKAFVPSAFQIRYGGYKGVVAVDPKSSKKLSLRKSMCKYESRNTKLDVLAYSKYQSYFLNRQLITLLSTLGVPDAVFERKQREAVAQLDAILTDPSKAMDALELMHPGETTNILKEMLLCDYKPDGEPFLSMMLQTFRASKLLNLRIKTKIYVQNGGNMMGCLDETRSLEYGQVFVQISGAKHWQLHGSFHESGGSIQKQHIIVLDDVFVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQRGPRPHPNECSGSDLDGDFYFVCWDPELIPRWQIPPMDYTPQPCKLLDHDVTIEEVEEYFTNYILNDSLGIISNAHIVFADREPLKAMSEPCLELAQKASIAVDFAKTGVPAEIPSHLRVKEFPDFMEKPDKPSYESRNVIGKLFREVKDIAPHTSSIRSFTREVARKSYDPDMEVDGFEYYIADAFRHKSNYDYVLGNYMDYYGIKTEAEIFGGSIMNMSKSFTKKRDAEAIRMAVRSLRKKARSWFNESSSDIDSDADNVYAKASAWYYVTYHHTYWGTYNEGMNRDHFLSFAWCIYDKLIEIKKRKIEIKKRKLASRRPSRMPYYPQNDFLNGFGDEFNHGLSLS |